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Pattern-ID: ASN_GLYCOSYLATION PS00001 PDOC00001
Pattern-DE: N-glycosylation site
Pattern: N[^P][ST][^P]
204 NHSV
Pattern-ID: PKC_PHOSPHO_SITE PS00005 PDOC00005
Pattern-DE: Protein kinase C phosphorylation site
Pattern: [ST].[RK]
70 SFR
118 SVR
206 SVR
266 SDR
310 TSR
349 SLR
375 TPR
491 TKK
509 TWK
513 SVR
618 TSR
644 TFR
655 TSR
953 SIR
1095 SLR
1104 SRK
Pattern-ID: CK2_PHOSPHO_SITE PS00006 PDOC00006
Pattern-DE: Casein kinase II phosphorylation site
Pattern: [ST].{2}[DE]
126 TVTD
206 SVRE
283 TSLE
334 SSGD
504 SLQE
513 SVRD
602 SEAE
765 TLTD
797 SLNE
1113 TALE
1129 TILD
Pattern-ID: MYRISTYL PS00008 PDOC00008
Pattern-DE: N-myristoylation site
Pattern: G[^EDRKHPFYW].{2}[STAGCN][^P]
198 GCERAW
211 GVPLGL
225 GGSASR
287 GALSGT
476 GLWGSR
527 GCVPAA
674 GLLGAS
715 GAYDTI
830 GIPQGS
895 GCVVNL
1053 GMSLGA
1094 GSLRTA
1109 GTTLTA
Pattern-ID: RGD PS00016 PDOC00016
Pattern-DE: Cell attachment sequence
Pattern: RGD
41 RGD
Pattern-ID: ATP_GTP_A PS00017 PDOC00017
Pattern-DE: ATP/GTP-binding site motif A (P-loop)
Pattern: [AG].{4}GK[ST]
817 AVRIRGKS
>prot (#) ppOld, default: single protein sequence description=telomerase /home/phd/server/work/predict_h27267
MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPW DARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVR
SYLPNTVTDALRGSGAWxxxxxxxxxxxxxxxx ARCALFVLVAPSCAYQVCGPPLYQLGA ATQARPPPHASGPRRRLGCERAWNHSVREAGVxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxx TPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVG RQHHAGPPSTSRxxxxxxxxxxx
VYAETKHFLYSSGDKEQxxxxxxxxxxxxxx TGARRL VETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVT
PAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGS RHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEI
LAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRE LSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKA
LFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQDPPPELYFVKVDVTGAYDTI PQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHL
QETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTL LCSLCYGDMENKLFAGIxxxxxxxxxxxxxxx
VTPHLTHAKTFLRTLVRGVPEYGCVVNL RKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTF
NRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLP FHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLL
KLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD
Identities computed with respect to: (query) prot Colored by: consensus/70% and sequence
HSP processing: ranked
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 . . . . : . . . . 5 . . . . : . . . . 6 . . . . : . . . . 7 . . . . : . . . . 8 . . . . : . . . . 9 . . . . : . . . . 0 . . . . : . . . . 1 . . . ] 1132 prot (#) ppOld, default: single ... score P(N) N 100.0% MPRAPRCRAVRSLLRSHYREVLPLATFVRRLGPQGWRLVQRGDPAAFRALVAQCLVCVPWDARPPPAAPSFRQVSCLKELVARVLQRLCERGAKNVLAFGFALLDGARGGPPEAFTTSVRSYLPNTVTDALRGSGAWGLLLRRVGDDVLVHLLARCALFVLVAPSCAYQVCGPPLYQLGAATQARPPPHASGPRRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVTPAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGSRHNERRFLRNTKKFISLGKHAKLSLQELTWKMSVRDCAWLRRSPGVGCVPAAEHRLREEILAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRELSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMDYVVGARTFRREKRAERLTSRVKALFSVLNYERARRPGLLGASVLGLDDIHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHLQETSPLRDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTLLCSLCYGDMENKLFAGIRRDGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNLRKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTFNRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRFHACVLQLPFHQQVWKNPTFFLRVISDTASLCYSILKAKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLLKLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTALEAAANPALPSDFKTILD 1 PD025577 p99.2 (3) O14746(1) O14783(... 903 4.8e-246 4 85.6% MPRAPRCPAVRSLLRSHYREVWPLATFVRRLGPQGWRLVQPGDPKAYRTLVAQCLVCMHWDARPPPADPSFHQVSCLKELVARVLQRLCERGEKNVLAFGFELLDGARGGPPEAFTTSVRSYLPNTVTDTLRGSGAWGLLLRRVGDDVLVHLLAHCALYVLVPPSCAYQVCGPPLYQLCATTDAWPPPHASYGPRRLGCERAWNHSRREAPKPLGLPAPGTRRHGGSTSRSLPLPKRPRCYPAPEPERGPHGQGSWTHPGRTWGPSPRGFCEVPPARPAEEDTSLEGKLSGTRHSHPSVCCQHHPGPPSTSRPPRPWDFPCPPVYAETKHFLYSRGDGKELNPSFLLSNLRPNLTGARRLVETIFLGSRPWMPGPPCRTHRLPQRYWQMR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 2 PD010158 p99.2 (9) // TELOMERASE RE... 461 3.6e-152 6 35.5% ----------------------------------------------------------------------------------------------------------------------------------------WYLLFEITGEDTMHYFCGNGSFFHAKPNDNYDQIQGGPLF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLIQQLLVNHKRFNYVYYLNKHCPL---------------------------------------HSSPWQVYGFLRACLQNIIPKNLWGSRHNEKRFLKNLKKFISLGKHEKLSLQELLWKMKVRDCEWLRISPSKAKMPKAEHEEREQILAKFLHWLFNDYVVPLLRSFFYITESTKQKNRIFYYRKDIWNKLMKLGITQHLKRENLEEIEEKEVRQHTESWQNFPPGKLRLIPKKNTFRPIMNFNKKIGAKDMKRNKKMETNTNLMKAHFMILNYKRMMRPHSFGFSVFNLDDIHR------------------------------------------SILMDENFYIMKQYAIKRKNNHGHVRKNFRKHVMTLYDMQPYQKQFVAHLQETSPLRDAVVIEQSSSWNESSSGLFDMFLRFMCHHVVKI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 3 PD025357 p99.2 (3) O14746(1) O14783(... 1018 2.7e-137 1 88.4% --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEPGTLGGTAPYQMPAHCLFPWCGLLLDTRTLEVFCDYSGYARTSIRTSLTFNRGFKAGRNMRNKLFGVLRLKCHGLFLDLQVNSLQTVCTNIYKIFLLQAYRFHACVLQLPFHQQVWKNPTFFLGVISDTASCCYSILKAKNPGMTLGAKGAAGPFPPEAVHWLCHQAFLLKLTRHRVTYKCLLGPLRTAQTQLCRKLPGTTMTALEAAANPALPTDFKTILD 4 PD043861 p99.2 (2) O14746(1) O14783(... 315 3.1e-37 1 100.0% ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLFLELLGNHAQCPYGVLLKTHCPLRAAVTPAAGVCAREKPQGSVAAPEEEDTDPRRLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 5 PD011861 p99.2 (8) // PROTEIN TELOM... 186 2.2e-20 4 13.0% ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSIPWMIDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSSQYVQCQGIPQGSILSTLLCELCMGDMDNKLFAGTKRDGFVLLRFVDDFLI-------------------EYNCVINLNKTKVNFPNSNGIINNTFF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 6 PD147020 p99.2 (3) O00939(1) O76332(... 81 9.4e-09 4 23.9% ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNYISFNKKKYKQKKGIPQGLCVSGILCSFYYGKLEEEYTQFLRDENMLMRLTDDYLFITDSQNNALNFIEKLQNCSNNNGFKFNDKKLTTNFQFPQE-----------------WIGKSIDMNTLEIKSN-------------------------------VCKIECYLQFFDEINKNFKEIFKNLY---------------------------------------------------------------------------------------------------------------------------------- 7 PD147940 p99.2 (2) O55225(1) P70670(... 51 0.0024 5 15.1% -------------------------------------------------------------------------------------------------------------------------------------------------------------------PTFLPHLTGPPIQTPAGLTTANPP---------------------------------------STSRSPPQPRFPLKGKAPCP----------------------------PAAQKTGTKEIPVACPGAKHHAPDPPPQHQATPATHAPPP---------------------------------------------------------------------------------------------------PLMSAVEPQAHKPFPKPPPTQAGAPTRKDTTLQPAAPIAKKESPPTQI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 8 PD147018 p99.2 (1) Q06163_YEAST // C... 55 0.0046 4 13.2% ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLKLFNVVNASRVPKP-----------------------------------------------------------------------------------------------------------------------------------------------ALWVEDKCYIREDGLFQGSSLSAPIVDLVYDDL---------QDTLILKLADDFLIISTDQQQVINIKKLAMGGFQKYNAKANRDK--------------------------------------------------------------KSSKGIFRSLIALFNTRISYKTIDTNLNSTNTVLMQI----------------------------------------------------------------------------------------------------------------------------------- 9 PD049991 p99.2 (1) Q18756_CAEEL // P... 51 0.013 2 19.5% ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPRPSRSPHSDAPEPSAATDG-----------------------------------------------GKHHSTGAPPSGGPPGPFD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 10 PD147859 p99.2 (1) Q25343_LEIMA // L... 46 0.016 6 29.7% ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPPRPPTSPPMHGGALVVRSPPSPLARRRVHTWTPSS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 11 PD141085 p99.2 (1) TS13_MOUSE // TES... 56 0.017 3 20.6% --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVGSTVARARPPSPQGPRR---------HGGLRTGPTSRCPQPSARAKLPSVTRGAPLPPSPGKG-------------------------------------------------------PSPGKGHLGGTPSSHR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 12 PD126680 p99.2 (1) O56073_VVVVV // P... 50 0.030 2 13.1% -------------------------------------------------------------ARPPPAA---------------------------------------------------------------------------------------------------------------AAAVAPPPPTGWTQADEEDLQRTKAAAIEAIGTGLGLPSPEA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- consensus/100% ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................. consensus/90% ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................. consensus/80% ....... .................................................................................................................... ............................................. ........................................................... ......... ................ ......................................................................................................... ................ ...................................... consensus/70% ................................ ................. .................... ........................................ .. ....... ................................. ............... .......... .... ......................... |
--- ------------------------------------------------------------ --- --- Again: these results were obtained based on the domain data- --- base collected by Daniel Kahn and his coworkers in Toulouse. --- --- PLEASE quote: --- F Corpet, J Gouzy, D Kahn (1998). The ProDom database --- of protein domain families. Nucleic Ac Res 26:323-326. --- --- The general WWW page is on: ---- --------------------------------------- --- http://www.toulouse.inra.fr/prodom.html ---- --------------------------------------- --- --- For WWW graphic interfaces to PRODOM, in particular for your --- protein family, follow the following links (each line is ONE --- single link for your protein!!): --- http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD025577 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD025577 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD025577 ==> graphical output of all proteins having domain PD025577 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD010158 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD010158 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD010158 ==> graphical output of all proteins having domain PD010158 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD025357 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD025357 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD025357 ==> graphical output of all proteins having domain PD025357 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD043861 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD043861 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD043861 ==> graphical output of all proteins having domain PD043861 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD011861 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD011861 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD011861 ==> graphical output of all proteins having domain PD011861 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD147020 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD147020 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD147020 ==> graphical output of all proteins having domain PD147020 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD147940 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD147940 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD147940 ==> graphical output of all proteins having domain PD147940 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD147018 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD147018 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD147018 ==> graphical output of all proteins having domain PD147018 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD049991 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD049991 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD049991 ==> graphical output of all proteins having domain PD049991 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD141085 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD141085 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD141085 ==> graphical output of all proteins having domain PD141085 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom1=PD126680 ==> multiple alignment, consensus, PDB and PROSITE links of domain PD126680 http://www.toulouse.inra.fr/prodom/cgi-bin/ReqProdomII.pl?id_dom2=PD126680 ==> graphical output of all proteins having domain PD126680 --- --- NOTE: if you want to use the link, make sure the entire line --- is pasted as URL into your browser! --- --- END of PRODOM --- ------------------------------------------------------------